Sequence Similarity Clusters for the Entities in PDB 1CJU

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 16 3258
95 % 5 16 4017 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 16 4046
70 % 5 16 3979
50 % 5 16 3856
40 % 5 16 3683
30 % 5 16 3427
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 17 2756
95 % 6 17 3452 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.9
PDBFlex
90 % 6 17 3503
70 % 6 17 3446
50 % 6 17 3369
40 % 6 17 3258
30 % 11 22 2206
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14192
95 % 6 20 2822 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.5
PDBFlex
90 % 6 20 2867
70 % 6 20 2838
50 % 6 20 2811
40 % 59 97 345
30 % 61 99 336

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.