Sequence Similarity Clusters for the Entities in PDB 1CJS

Entity #1 | Chains: A
50S RIBOSOMAL PROTEIN L1P protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 15940
95 % 3 4 14910 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 3 4 14656
70 % 3 5 10192
50 % 3 7 7174
40 % 3 13 4154
30 % 14 204 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures