Sequence Similarity Clusters for the Entities in PDB 1CJK

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3225
95 % 9 16 3988 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 9 16 4018
70 % 9 16 3952
50 % 9 16 3828
40 % 9 16 3664
30 % 9 16 3406
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 2727
95 % 10 17 3424
90 % 10 17 3474
70 % 10 17 3424
50 % 10 17 3341
40 % 10 17 3240
30 % 15 22 2181
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 14102
95 % 10 20 2802 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.5
PDBFlex
90 % 10 20 2848
70 % 10 20 2819
50 % 10 20 2786
40 % 69 97 337
30 % 71 99 332

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.