Sequence Similarity Clusters for the Entities in PDB 1CJK

Entity #1 | Chains: A
ADENYLATE CYCLASE, TYPE V protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3364
95 % 9 16 4140 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 9 16 4170
70 % 9 16 4106
50 % 9 16 3961
40 % 9 16 3782
30 % 9 16 3523
Entity #2 | Chains: B
ADENYLATE CYCLASE, TYPE II protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 2849
95 % 10 17 3550 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.8
PDBFlex
90 % 10 17 3602
70 % 10 17 3552
50 % 10 17 3461
40 % 10 17 3346
30 % 19 26 1826
Entity #3 | Chains: C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 14646
95 % 10 20 2910 Flexibility: Low
Max RMSD: 18.4, Avg RMSD: 2.4
PDBFlex
90 % 10 20 2955
70 % 10 20 2918
50 % 10 20 2882
40 % 69 97 361
30 % 71 99 352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.