Sequence Similarity Clusters for the Entities in PDB 1CJF

Entity #1 | Chains: A,B
PROTEIN (HUMAN PLATELET PROFILIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 4510
95 % 11 12 4314 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 12 17 3083
70 % 12 17 3055
50 % 15 21 2109
40 % 15 21 2109
30 % 29 44 981
Entity #2 | Chains: C,D
PROTEIN (PROLINE PEPTIDE) protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures