Sequence Similarity Clusters for the Entities in PDB 1CJF

Entity #1 | Chains: A,B
PROTEIN (HUMAN PLATELET PROFILIN) protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 4165
95 % 11 12 4053 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 12 17 2892
70 % 12 17 2873
50 % 15 21 1980
40 % 15 21 1987
30 % 27 42 969
Entity #2 | Chains: C,D
PROTEIN (PROLINE PEPTIDE) protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.