Sequence Similarity Clusters for the Entities in PDB 1CJ0

Entity #1 | Chains: A,B
PROTEIN (SERINE HYDROXYMETHYLTRANSFERASE) protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11486
95 % 4 6 4672 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 8 3345
70 % 5 8 3305
50 % 8 11 2477
40 % 83 88 291
30 % 83 90 271

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures