Sequence Similarity Clusters for the Entities in PDB 1CIC

Entity #1 | Chains: A
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61504
95 % 1 1 43077
90 % 28 73 435
70 % 1020 2392 1
50 % 2084 4843 1
40 % 2084 4843 1
30 % 2350 5705 1
Entity #2 | Chains: B
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61130
95 % 1 1 42898
90 % 1 1 40833
70 % 1007 2342 2
50 % 2085 4843 1
40 % 2085 4843 1
30 % 2351 5705 1
Entity #3 | Chains: C
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61505
95 % 10 26 1050
90 % 15 37 779
70 % 1021 2392 1
50 % 2086 4843 1
40 % 2086 4843 1
30 % 2352 5705 1
Entity #4 | Chains: D
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41045
95 % 1 2 31357 Flexibility: Medium
Max RMSD: 3.9, Avg RMSD: 3.9
PDBFlex
90 % 5 11 5882
70 % 1008 2342 2
50 % 2087 4843 1
40 % 2087 4843 1
30 % 2353 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures