Sequence Similarity Clusters for the Entities in PDB 1CIC

Entity #1 | Chains: A
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59063
95 % 1 1 41377
90 % 28 67 424
70 % 782 1845 2
50 % 1944 4545 1
40 % 1944 4545 1
30 % 2188 5350 1
Entity #2 | Chains: B
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58716
95 % 1 1 41209
90 % 1 1 39289
70 % 941 2201 1
50 % 1945 4545 1
40 % 1945 4545 1
30 % 2189 5350 1
Entity #3 | Chains: C
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59064
95 % 10 26 1007 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 15 37 747
70 % 783 1845 2
50 % 1946 4545 1
40 % 1946 4545 1
30 % 2190 5350 1
Entity #4 | Chains: D
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39312
95 % 1 2 30063
90 % 4 9 7503
70 % 942 2201 1
50 % 1947 4545 1
40 % 1947 4545 1
30 % 2191 5350 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.