Sequence Similarity Clusters for the Entities in PDB 1CIC

Entity #1 | Chains: A
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62648
95 % 1 1 43836
90 % 30 77 405
70 % 1064 2474 1
50 % 2174 5011 1
40 % 2174 5011 1
30 % 2482 5941 1
Entity #2 | Chains: B
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62268
95 % 1 1 43656
90 % 1 1 41519
70 % 1051 2424 2
50 % 2175 5011 1
40 % 2175 5011 1
30 % 2483 5941 1
Entity #3 | Chains: C
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62649
95 % 10 26 1072
90 % 15 37 791
70 % 1065 2474 1
50 % 2176 5011 1
40 % 2176 5011 1
30 % 2484 5941 1
Entity #4 | Chains: D
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41855
95 % 1 2 31927 Flexibility: Medium
Max RMSD: 3.9, Avg RMSD: 3.9
PDBFlex
90 % 5 11 6011
70 % 1052 2424 2
50 % 2177 5011 1
40 % 2177 5011 1
30 % 2485 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures