Sequence Similarity Clusters for the Entities in PDB 1CIC

Entity #1 | Chains: A
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60648
95 % 1 1 42499
90 % 28 73 392
70 % 983 2327 1
50 % 2009 4713 1
40 % 2009 4713 1
30 % 2268 5567 1
Entity #2 | Chains: B
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60283
95 % 1 1 42320
90 % 1 1 40309
70 % 971 2280 2
50 % 2010 4713 1
40 % 2010 4713 1
30 % 2269 5567 1
Entity #3 | Chains: C
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60649
95 % 10 26 1032
90 % 15 37 765
70 % 984 2327 1
50 % 2011 4713 1
40 % 2011 4713 1
30 % 2270 5567 1
Entity #4 | Chains: D
PROTEIN (IG HEAVY CHAIN V REGIONS) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40434
95 % 1 2 30902 Flexibility: Medium
Max RMSD: 3.9, Avg RMSD: 3.9
PDBFlex
90 % 4 9 7737
70 % 972 2280 2
50 % 2012 4713 1
40 % 2012 4713 1
30 % 2271 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.