Sequence Similarity Clusters for the Entities in PDB 1CI6

Entity #1 | Chains: A
TRANSCRIPTION FACTOR ATF-4 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72069
95 % 1 1 50062
90 % 1 1 47531
70 % 1 1 41722
50 % 1 1 35569
40 % 1 1 31320
30 % 1 1 26433
Entity #2 | Chains: B
TRANSCRIPTION FACTOR C/EBP BETA protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72070
95 % 2 2 24661 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.0
PDBFlex
90 % 2 2 23864
70 % 2 2 21727
50 % 2 2 18822
40 % 2 2 16756
30 % 2 2 14365

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.