Sequence Similarity Clusters for the Entities in PDB 1CI6

Entity #1 | Chains: A
TRANSCRIPTION FACTOR ATF-4 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72954
95 % 1 1 50659
90 % 1 1 48054
70 % 1 1 42137
50 % 1 1 35918
40 % 1 1 31618
30 % 1 1 26688
Entity #2 | Chains: B
TRANSCRIPTION FACTOR C/EBP BETA protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72955
95 % 2 2 24964 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.0
PDBFlex
90 % 2 2 24145
70 % 2 2 21954
50 % 2 2 19008
40 % 2 2 16919
30 % 2 2 14505

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures