Sequence Similarity Clusters for the Entities in PDB 1CI6

Entity #1 | Chains: A
TRANSCRIPTION FACTOR ATF-4 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58288
95 % 1 1 47697
90 % 1 1 45311
70 % 1 1 39808
50 % 1 1 33778
40 % 1 1 29596
30 % 1 1 24707
Entity #2 | Chains: B
TRANSCRIPTION FACTOR C/EBP BETA protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58286
95 % 2 2 24578 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.0
PDBFlex
90 % 2 2 23755
70 % 2 2 21587
50 % 2 2 18552
40 % 2 2 16407
30 % 2 2 13755

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures