Sequence Similarity Clusters for the Entities in PDB 1CHU

Entity #1 | Chains: A
PROTEIN (L-ASPARTATE OXIDASE) protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53228
95 % 1 3 26340 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 1 3 25410
70 % 2 4 19703
50 % 2 4 17008
40 % 2 4 15023
30 % 12 76 470

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures