Sequence Similarity Clusters for the Entities in PDB 1CHQ

Entity #1 | Chains: D,E,F,G,H
CHOLERA TOXIN B PENTAMER protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 23 255
95 % 27 32 218 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 42 55 83
70 % 45 58 94
50 % 45 58 128
40 % 45 58 147
30 % 45 58 161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures