Sequence Similarity Clusters for the Entities in PDB 1CHP

Entity #1 | Chains: D,E,F,G,H
CHOLERA TOXIN B PENTAMER protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15821
95 % 23 32 198 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 33 55 74
70 % 36 58 80
50 % 36 58 113
40 % 36 58 136
30 % 36 58 144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.