Sequence Similarity Clusters for the Entities in PDB 1CGS

Entity #1 | Chains: L
IGG2B-KAPPA NC6.8 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 20094
95 % 112 142 152
90 % 117 149 151
70 % 1093 1803 2
50 % 2679 4435 1
40 % 2679 4435 1
30 % 3092 5225 1
Entity #2 | Chains: H
IGG2B-KAPPA NC6.8 FAB (HEAVY CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26347
95 % 4 4 17537
90 % 4 4 17149
70 % 1296 2145 1
50 % 2680 4435 1
40 % 2680 4435 1
30 % 3093 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.