Sequence Similarity Clusters for the Entities in PDB 1CGQ

Entity #1 | Chains: A,B,C
PROTEIN (MACROPHAGE MIGRATION INHIBITORY FACTOR) protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 62 105
95 % 65 73 124 Flexibility: No
Max RMSD: 3.4, Avg RMSD: 0.5
PDBFlex
90 % 65 73 128
70 % 68 77 141
50 % 68 78 165
40 % 69 79 178
30 % 81 97 139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.