Sequence Similarity Clusters for the Entities in PDB 1CGM

Entity #1 | Chains: I
RNA (5'-R(P*GP*AP*A)-3') rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
CUCUMBER GREEN MOTTLE MOSAIC VIRUS protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66013
95 % 1 1 45664
90 % 1 1 43281
70 % 1 1 38011
50 % 1 1 32339
40 % 8 10 5670
30 % 8 10 5086

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures