Sequence Similarity Clusters for the Entities in PDB 1CGM

Entity #1 | Chains: I
RNA (5'-R(P*GP*AP*A)-3') rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
CUCUMBER GREEN MOTTLE MOSAIC VIRUS protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60412
95 % 1 1 41799
90 % 1 1 39762
70 % 1 1 35111
50 % 1 1 30009
40 % 8 10 5166
30 % 8 10 4631

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.