Sequence Similarity Clusters for the Entities in PDB 1CGM

Entity #1 | Chains: I
RNA (5'-R(P*GP*AP*A)-3') rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
CUCUMBER GREEN MOTTLE MOSAIC VIRUS protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64803
95 % 1 1 44875
90 % 1 1 42569
70 % 1 1 37406
50 % 1 1 31847
40 % 8 10 5568
30 % 8 10 4992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures