Sequence Similarity Clusters for the Entities in PDB 1CGJ

Entity #1 | Chains: E
ALPHA-CHYMOTRYPSINOGEN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 26 816
95 % 21 26 1115 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 21 26 1134
70 % 21 26 1175
50 % 21 26 1218
40 % 1354 1698 4
30 % 1460 1848 6
Entity #2 | Chains: I
PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 4 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73356
95 % 3 3 25035 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.5
PDBFlex
90 % 3 3 24210
70 % 4 4 18773
50 % 4 4 16307
40 % 4 5 11241
30 % 4 6 8832

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures