Sequence Similarity Clusters for the Entities in PDB 1CGJ

Entity #1 | Chains: E
ALPHA-CHYMOTRYPSINOGEN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 26 826
95 % 21 26 1129 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 21 26 1149
70 % 21 26 1188
50 % 21 26 1239
40 % 1372 1720 4
30 % 1478 1870 6
Entity #2 | Chains: I
PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 4 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74304
95 % 3 3 25373 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.5
PDBFlex
90 % 3 3 24529
70 % 4 4 19036
50 % 4 4 16533
40 % 4 5 11395
30 % 4 6 8954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures