Sequence Similarity Clusters for the Entities in PDB 1CGI

Entity #1 | Chains: E
ALPHA-CHYMOTRYPSINOGEN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 26 819
95 % 20 26 1124 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 20 26 1142
70 % 20 26 1181
50 % 20 26 1230
40 % 1369 1719 4
30 % 1475 1869 6
Entity #2 | Chains: I
PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 3 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 49467
95 % 2 3 25243 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.5
PDBFlex
90 % 2 3 24412
70 % 3 4 18944
50 % 3 4 16458
40 % 3 5 11341
30 % 3 6 8917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures