Sequence Similarity Clusters for the Entities in PDB 1CGI

Entity #1 | Chains: E
ALPHA-CHYMOTRYPSINOGEN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 26 979
95 % 20 26 1183 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 20 26 1206
70 % 20 26 1231
50 % 20 26 1268
40 % 1485 1885 4
30 % 1494 1899 7
Entity #2 | Chains: I
PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 3 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27973
95 % 2 3 24511 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.5
PDBFlex
90 % 2 3 23692
70 % 3 4 17352
50 % 3 4 15120
40 % 3 5 10893
30 % 40 59 953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures