Sequence Similarity Clusters for the Entities in PDB 1CGI

Entity #1 | Chains: E
ALPHA-CHYMOTRYPSINOGEN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 26 828
95 % 20 26 1131 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 20 26 1151
70 % 20 26 1190
50 % 20 26 1243
40 % 1371 1721 4
30 % 1477 1871 6
Entity #2 | Chains: I
PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 3 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 49812
95 % 2 3 25410 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.5
PDBFlex
90 % 2 3 24566
70 % 3 4 19064
50 % 3 4 16553
40 % 3 5 11411
30 % 3 6 8964

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures