Sequence Similarity Clusters for the Entities in PDB 1CG9

Entity #1 | Chains: A
PROTEIN (HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B* 3501 ALPHA CHAIN) protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54271
95 % 114 129 218
90 % 168 189 144
70 % 519 664 7
50 % 520 669 7
40 % 555 717 10
30 % 603 834 15
Entity #2 | Chains: B
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 461 579 2
95 % 494 622 3
90 % 500 631 4
70 % 640 859 5
50 % 650 879 5
40 % 650 879 9
30 % 650 879 14
Entity #3 | Chains: C
PROTEIN (EBNA-6 NUCLEAR PROTEIN (EBNA-3C) (EBNA-4B)) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.