Sequence Similarity Clusters for the Entities in PDB 1CFV

Entity #1 | Chains: L
MONOCLONAL ANTIBODY FV4155 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29484
95 % 1 3 24465 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 23661
70 % 7 20 1885
50 % 113 308 21
40 % 326 933 5
30 % 368 1061 7
Entity #2 | Chains: H
MONOCLONAL ANTIBODY FV4155 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29369
95 % 1 3 24380 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 3 23577
70 % 141 383 9
50 % 201 580 7
40 % 327 933 5
30 % 369 1061 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures