Sequence Similarity Clusters for the Entities in PDB 1CFT

Entity #1 | Chains: A
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9689
95 % 4 8 8612
90 % 14 22 2513
70 % 1337 1729 2
50 % 3213 4220 1
40 % 3213 4221 1
30 % 3770 4972 1
Entity #2 | Chains: B
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN)) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 8393
95 % 4 8 8614
90 % 4 8 8531
70 % 1552 2041 1
50 % 3214 4220 1
40 % 3214 4221 1
30 % 3771 4972 1
Entity #3 | Chains: C
PROTEIN (ANTIGEN BOUND PEPTIDE) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.