Sequence Similarity Clusters for the Entities in PDB 1CFT

Entity #1 | Chains: A
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9995
95 % 4 8 8895
90 % 17 25 2205
70 % 1387 1803 2
50 % 3360 4435 1
40 % 3360 4435 1
30 % 3952 5225 1
Entity #2 | Chains: B
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN)) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 8674
95 % 4 8 8897
90 % 4 8 8802
70 % 1623 2145 1
50 % 3361 4435 1
40 % 3361 4435 1
30 % 3953 5225 1
Entity #3 | Chains: C
PROTEIN (ANTIGEN BOUND PEPTIDE) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.