Sequence Similarity Clusters for the Entities in PDB 1CFT

Entity #1 | Chains: A
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9839
95 % 4 8 8759
90 % 14 22 2569
70 % 1363 1766 2
50 % 3306 4347 1
40 % 3306 4347 1
30 % 3889 5126 1
Entity #2 | Chains: B
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN)) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 8547
95 % 4 8 8761
90 % 4 8 8670
70 % 1596 2101 1
50 % 3307 4347 1
40 % 3307 4347 1
30 % 3890 5126 1
Entity #3 | Chains: C
PROTEIN (ANTIGEN BOUND PEPTIDE) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.