Sequence Similarity Clusters for the Entities in PDB 1CFN

Entity #1 | Chains: A
PROTEIN (IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN)) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 10321
95 % 6 8 9202
90 % 21 26 2101
70 % 1853 2280 1
50 % 3761 4619 1
40 % 3761 4619 1
30 % 4440 5440 1
Entity #2 | Chains: B
PROTEIN (IGG2A-KAPPA ANTIBODY CB41 (HEAVY CHAIN)) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 8971
95 % 6 8 9205
90 % 6 8 9112
70 % 1819 2238 2
50 % 3762 4619 1
40 % 3762 4619 1
30 % 4441 5440 1
Entity #3 | Chains: C
PROTEIN (BOUND PEPTIDE) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.