Sequence Similarity Clusters for the Entities in PDB 1CFF

Entity #1 | Chains: A
PROTEIN (CALMODULIN) protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 145 149 96
95 % 180 187 82
90 % 193 200 81
70 % 195 202 96
50 % 225 235 105
40 % 348 358 41
30 % 375 385 50
Entity #2 | Chains: B
PROTEIN (CALCIUM PUMP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77582
95 % 1 1 54150
90 % 1 1 51292
70 % 1 1 44870
50 % 1 1 38310
40 % 1 1 33831
30 % 1 1 28764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures