Sequence Similarity Clusters for the Entities in PDB 1CFF

Entity #1 | Chains: A
PROTEIN (CALMODULIN) protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 186 60
95 % 183 190 79
90 % 196 203 77
70 % 198 205 93
50 % 228 238 105
40 % 351 361 40
30 % 420 432 43
Entity #2 | Chains: B
PROTEIN (CALCIUM PUMP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59697
95 % 1 1 48759
90 % 1 1 46280
70 % 1 1 40592
50 % 1 1 34442
40 % 1 1 29227
30 % 1 1 25192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures