Sequence Similarity Clusters for the Entities in PDB 1CFF

Entity #1 | Chains: A
PROTEIN (CALMODULIN) protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 137 141 101
95 % 171 178 90
90 % 184 191 87
70 % 186 193 103
50 % 216 226 112
40 % 339 349 43
30 % 366 376 51
Entity #2 | Chains: B
PROTEIN (CALCIUM PUMP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76622
95 % 1 1 53487
90 % 1 1 50686
70 % 1 1 44354
50 % 1 1 37873
40 % 1 1 33440
30 % 1 1 28428

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures