Sequence Similarity Clusters for the Entities in PDB 1CF7

Entity #1 | Chains: C
DNA (5'-D(*AP*TP*TP*TP*TP*CP*GP*CP*GP*CP*GP*GP*TP*TP*TP*T)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(*TP*AP*AP*AP*AP*CP*CP*GP*CP*GP*CP*GP*AP*AP*AP*A)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (TRANSCRIPTION FACTOR E2F-4) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71140
95 % 1 1 49339
90 % 1 1 46837
70 % 1 1 41110
50 % 1 1 35068
40 % 1 1 30908
30 % 1 1 26077
Entity #4 | Chains: B
PROTEIN (TRANSCRIPTION FACTOR DP-2) protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69628
95 % 1 1 48105
90 % 1 1 45642
70 % 1 1 40046
50 % 1 1 34147
40 % 1 1 30112
30 % 1 1 25413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.