Sequence Similarity Clusters for the Entities in PDB 1CF7

Entity #1 | Chains: C
DNA (5'-D(*AP*TP*TP*TP*TP*CP*GP*CP*GP*CP*GP*GP*TP*TP*TP*T)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(*TP*AP*AP*AP*AP*CP*CP*GP*CP*GP*CP*GP*AP*AP*AP*A)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (TRANSCRIPTION FACTOR E2F-4) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71928
95 % 1 1 49859
90 % 1 1 47299
70 % 1 1 41473
50 % 1 1 35378
40 % 1 1 31177
30 % 1 1 26310
Entity #4 | Chains: B
PROTEIN (TRANSCRIPTION FACTOR DP-2) protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70407
95 % 1 1 48623
90 % 1 1 46105
70 % 1 1 40408
50 % 1 1 34456
40 % 1 1 30380
30 % 1 1 25645

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.