Sequence Similarity Clusters for the Entities in PDB 1CF2

Entity #1 | Chains: O,P,Q,R
PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE) protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21447
95 % 1 1 19356 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18978
70 % 1 1 17602
50 % 3 3 7301
40 % 3 4 5930
30 % 3 4 5612

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures