Sequence Similarity Clusters for the Entities in PDB 1CEZ

Entity #1 | Chains: T
DNA (5'-D(P*TP*AP*TP*AP*GP*TP*GP*AP*GP*TP*CP*GP*TP*AP*TP*TP*A)-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: N
DNA (5'-D(P*TP*AP*AP*TP*AP*CP*GP*AP*CP*TP*CP*AP*CP*TP*A)-3') dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (BACTERIOPHAGE T7 RNA POLYMERASE) protein, length: 883 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 2700
95 % 3 13 2719 Flexibility: High
Max RMSD: 19.2, Avg RMSD: 10.4
PDBFlex
90 % 3 13 2765
70 % 3 13 2743
50 % 3 13 2706
40 % 3 13 2665
30 % 3 13 2505

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.