Sequence Similarity Clusters for the Entities in PDB 1CEF

Entity #1 | Chains: A
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE TRANSPEPTIDASE protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 15 3483
95 % 15 15 4260 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 15 15 4287
70 % 15 15 4206
50 % 15 15 4065
40 % 15 15 3887
30 % 16 16 3377

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.