Sequence Similarity Clusters for the Entities in PDB 1CEB

Entity #1 | Chains: A,B
PLASMINOGEN protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 9990
95 % 3 6 10040 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 3 6 9917
70 % 3 6 9425
50 % 12 25 1935
40 % 12 31 1414
30 % 12 31 1393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures