Sequence Similarity Clusters for the Entities in PDB 1CE8

Entity #1 | Chains: A,C,E,G
PROTEIN (CARBAMOYL-PHOSPHATE SYNTHASE) protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7570
95 % 9 10 1298 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.3
PDBFlex
90 % 9 10 1324
70 % 9 10 1347
50 % 9 10 1393
40 % 9 10 1401
30 % 9 10 1383
Entity #2 | Chains: B,D,F,H
PROTEIN (CARBAMOYL-PHOSPHATE SYNTHASE) protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4724
95 % 9 10 1317 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 9 10 1342
70 % 9 10 1360
50 % 9 10 1411
40 % 9 10 1423
30 % 9 10 1398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.