Sequence Similarity Clusters for the Entities in PDB 1CE8

Entity #1 | Chains: A,C,E,G
PROTEIN (CARBAMOYL-PHOSPHATE SYNTHASE) protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7734
95 % 9 10 1328 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.3
PDBFlex
90 % 9 10 1352
70 % 9 10 1372
50 % 9 10 1420
40 % 9 10 1430
30 % 9 10 1409
Entity #2 | Chains: B,D,F,H
PROTEIN (CARBAMOYL-PHOSPHATE SYNTHASE) protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4830
95 % 9 10 1348 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 9 10 1371
70 % 9 10 1386
50 % 9 10 1437
40 % 9 10 1449
30 % 9 10 1422

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures