Sequence Similarity Clusters for the Entities in PDB 1CE6

Entity #1 | Chains: A
PROTEIN (MHC CLASS I H-2DB HEAVY CHAIN) protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 55 201
95 % 50 59 261
90 % 51 61 265
70 % 608 668 7
50 % 610 673 7
40 % 651 723 10
30 % 729 840 15
Entity #2 | Chains: B
PROTEIN (HUMAN BETA-2 MICROGLOBULIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 519 579 2
95 % 559 622 3
90 % 568 631 4
70 % 757 861 5
50 % 772 883 5
40 % 772 883 9
30 % 772 883 14
Entity #3 | Chains: C
PROTEIN (SENDAI VIRUS NUCLEOPROTEIN) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.