Sequence Similarity Clusters for the Entities in PDB 1CE6

Entity #1 | Chains: A
PROTEIN (MHC CLASS I H-2DB HEAVY CHAIN) protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 46 240
95 % 42 50 323
90 % 43 52 336
70 % 585 644 7
50 % 587 649 7
40 % 620 691 11
30 % 698 807 14
Entity #2 | Chains: B
PROTEIN (HUMAN BETA-2 MICROGLOBULIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 499 558 2
95 % 539 601 3
90 % 548 610 4
70 % 734 837 5
50 % 747 857 5
40 % 747 857 9
30 % 747 857 13
Entity #3 | Chains: C
PROTEIN (SENDAI VIRUS NUCLEOPROTEIN) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.