Sequence Similarity Clusters for the Entities in PDB 1CE6

Entity #1 | Chains: A
PROTEIN (MHC CLASS I H-2DB HEAVY CHAIN) protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 55 207
95 % 50 59 269
90 % 51 61 276
70 % 631 692 6
50 % 633 697 6
40 % 675 748 10
30 % 756 868 15
Entity #2 | Chains: B
PROTEIN (HUMAN BETA-2 MICROGLOBULIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 540 600 2
95 % 581 644 3
90 % 590 653 4
70 % 781 885 4
50 % 796 907 3
40 % 796 907 9
30 % 796 907 14
Entity #3 | Chains: C
PROTEIN (SENDAI VIRUS NUCLEOPROTEIN) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.