Sequence Similarity Clusters for the Entities in PDB 1CE1

Entity #1 | Chains: L
PROTEIN (CAMPATH-1H:LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40806
95 % 1 2 31128 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 152 720 3
70 % 503 2327 1
50 % 1038 4713 1
40 % 1038 4713 1
30 % 1143 5567 1
Entity #2 | Chains: H
PROTEIN (CAMPATH-1H:HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40221
95 % 1 2 30780 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 29608
70 % 503 2280 2
50 % 1039 4713 1
40 % 1039 4713 1
30 % 1144 5567 1
Entity #3 | Chains: P
PROTEIN (PEPTIDE ANTIGEN) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.