Sequence Similarity Clusters for the Entities in PDB 1CE1

Entity #1 | Chains: L
PROTEIN (CAMPATH-1H:LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42295
95 % 1 2 32201 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 180 791 2
70 % 551 2479 1
50 % 1137 5021 1
40 % 1137 5021 1
30 % 1283 5951 1
Entity #2 | Chains: H
PROTEIN (CAMPATH-1H:HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41685
95 % 1 2 31837 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 30599
70 % 551 2429 2
50 % 1138 5021 1
40 % 1138 5021 1
30 % 1284 5951 1
Entity #3 | Chains: P
PROTEIN (PEPTIDE ANTIGEN) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures