Sequence Similarity Clusters for the Entities in PDB 1CE1

Entity #1 | Chains: L
PROTEIN (CAMPATH-1H:LIGHT CHAIN) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41737
95 % 1 2 31789 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 169 763 2
70 % 531 2426 1
50 % 1096 4913 1
40 % 1096 4913 1
30 % 1206 5780 1
Entity #2 | Chains: H
PROTEIN (CAMPATH-1H:HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41135
95 % 1 2 31430 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 30213
70 % 531 2376 2
50 % 1097 4913 1
40 % 1097 4913 1
30 % 1207 5780 1
Entity #3 | Chains: P
PROTEIN (PEPTIDE ANTIGEN) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures