Sequence Similarity Clusters for the Entities in PDB 1CDT

Entity #1 | Chains: A,B
CARDIOTOXIN VII4 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48704
95 % 1 1 36380 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 34757
70 % 5 28 1272
50 % 6 31 1164
40 % 37 123 302
30 % 38 125 303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.