Sequence Similarity Clusters for the Entities in PDB 1CDT

Entity #1 | Chains: A,B
CARDIOTOXIN VII4 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47348
95 % 1 1 35385 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 33829
70 % 5 26 1308
50 % 6 29 1184
40 % 37 121 295
30 % 38 123 298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.