Sequence Similarity Clusters for the Entities in PDB 1CDT

Entity #1 | Chains: A,B
CARDIOTOXIN VII4 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49699
95 % 1 1 37081 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35394
70 % 5 29 1284
50 % 6 32 1170
40 % 37 124 313
30 % 38 126 312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures