Sequence Similarity Clusters for the Entities in PDB 1CDM

Entity #1 | Chains: A
PEPTIDE CALMODULIN-DEPENDENT PROTEIN KINASE II protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 126 97
95 % 43 160 100
90 % 54 173 79
70 % 55 175 95
50 % 63 208 106
40 % 70 328 31
30 % 74 355 44
Entity #2 | Chains: B
CALMODULIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 28228
95 % 2 3 23400
90 % 2 3 22656
70 % 2 3 20743
50 % 2 3 18049
40 % 2 3 16074
30 % 2 3 13809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.