Sequence Similarity Clusters for the Entities in PDB 1CDM

Entity #1 | Chains: A
PEPTIDE CALMODULIN-DEPENDENT PROTEIN KINASE II protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 125 97
95 % 43 159 101
90 % 54 172 79
70 % 55 174 94
50 % 63 207 107
40 % 70 325 30
30 % 74 352 43
Entity #2 | Chains: B
CALMODULIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27909
95 % 2 3 23135
90 % 2 3 22399
70 % 2 3 20502
50 % 2 3 17839
40 % 2 3 15888
30 % 2 3 13632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.