Sequence Similarity Clusters for the Entities in PDB 1CDL

Entity #1 | Chains: A,B,C,D
CALMODULIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 130 101
95 % 43 165 102
90 % 54 178 82
70 % 55 180 98
50 % 63 213 112
40 % 70 336 36
30 % 74 363 47
Entity #2 | Chains: E,F,G,H
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II ALPHA CHAIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 9828
95 % 5 5 8007
90 % 5 5 7963
70 % 5 5 7700
50 % 5 5 7097
40 % 5 5 6597
30 % 5 5 5885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.