1CDK

CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT (E.C.2.7.1.37) (PROTEIN KINASE A) COMPLEXED WITH PROTEIN KINASE INHIBITOR PEPTIDE FRAGMENT 5-24 (PKI(5-24) ISOELECTRIC VARIANT CA) AND MN2+ ADENYLYL IMIDODIPHOSPHATE (MNAMP-PNP) AT PH 5.6 AND 7C AND 4C


Sequence Similarity Clusters for the Entities in PDB 1CDK

Entity #1 | Chains: A,B
CAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 16085
95 % 123 240 128 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 123 241 131
70 % 123 241 151
50 % 123 241 180
40 % 147 327 138
30 % 1394 4287 2
Entity #2 | Chains: I,J
PROTEIN KINASE INHIBITOR protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 75 153 180
95 % 75 153 228 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 75 153 237
70 % 75 153 268
50 % 75 153 296
40 % 75 153 326
30 % 75 153 334

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures