Sequence Similarity Clusters for the Entities in PDB 1CDI

Entity #1 | Chains: A
T CELL SURFACE GLYCOPROTEIN CD4 protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 38 718
95 % 22 43 861 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 22 43 893
70 % 22 43 921
50 % 22 43 966
40 % 22 43 990
30 % 22 43 967

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures