Sequence Similarity Clusters for the Entities in PDB 1CDI

Entity #1 | Chains: A
T CELL SURFACE GLYCOPROTEIN CD4 protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 38 709
95 % 22 43 842 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 22 43 874
70 % 22 43 908
50 % 22 43 956
40 % 22 43 982
30 % 22 43 955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.