Sequence Similarity Clusters for the Entities in PDB 1CDG

Entity #1 | Chains: A
CYCLODEXTRIN GLYCOSYL-TRANSFERASE protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 14384
95 % 6 24 2294 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 6 24 2358
70 % 14 48 889
50 % 16 52 884
40 % 18 54 887
30 % 18 54 873

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.