Sequence Similarity Clusters for the Entities in PDB 1CDE

Entity #1 | Chains: A,B,C,D
PHOSPHORIBOSYL-GLYCINAMIDE FORMYLTRANSFERASE protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2936
95 % 7 9 3235 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 7 9 3281
70 % 7 9 3248
50 % 8 10 2994
40 % 39 41 835
30 % 40 42 811

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures