Sequence Similarity Clusters for the Entities in PDB 1CDC

Entity #1 | Chains: A,B
CD2 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48678
95 % 1 5 6730 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 2.9
PDBFlex
90 % 1 5 6720
70 % 1 5 6545
50 % 1 5 6107
40 % 1 8 4215
30 % 1 8 3893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures