Sequence Similarity Clusters for the Entities in PDB 1CD8

Entity #1 | Chains: A
T CELL CORECEPTOR CD8 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10661
95 % 3 5 6428 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 5 6412
70 % 3 5 6265
50 % 5 7 4237
40 % 6 12 2196
30 % 6 12 2099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.