Sequence Similarity Clusters for the Entities in PDB 1CD8

Entity #1 | Chains: A
T CELL CORECEPTOR CD8 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6433
95 % 3 5 6581 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 5 6570
70 % 3 5 6371
50 % 5 7 4281
40 % 6 12 2333
30 % 3728 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures