Sequence Similarity Clusters for the Entities in PDB 1CD5

Entity #1 | Chains: A
PROTEIN (GLUCOSAMINE 6-PHOSPHATE DEAMINASE) protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 2870
95 % 11 11 3380 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 11 11 3427
70 % 13 13 2288
50 % 14 14 1805
40 % 14 14 1815
30 % 18 18 1401

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.