Sequence Similarity Clusters for the Entities in PDB 1CD5

Entity #1 | Chains: A
PROTEIN (GLUCOSAMINE 6-PHOSPHATE DEAMINASE) protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 3132
95 % 11 11 3646 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 11 11 3707
70 % 13 13 2498
50 % 14 14 1963
40 % 14 14 1962
30 % 18 18 1488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures