Sequence Similarity Clusters for the Entities in PDB 1CC1

Entity #1 | Chains: S
HYDROGENASE (SMALL SUBUNIT) protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57010
95 % 7 7 5108 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.3
PDBFlex
90 % 7 7 5133
70 % 7 7 5032
50 % 12 12 3435
40 % 49 59 458
30 % 49 59 457
Entity #2 | Chains: L
HYDROGENASE (LARGE SUBUNIT) protein, length: 498 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51816
95 % 7 7 5026 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 7 5045
70 % 7 7 4935
50 % 18 18 2451
40 % 18 18 2426
30 % 72 83 326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.