Sequence Similarity Clusters for the Entities in PDB 1CC0

Entity #1 | Chains: A,C
transforming protein rhoA protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 16 1842
95 % 43 43 649
90 % 43 43 674
70 % 45 45 665
50 % 135 136 185
40 % 136 137 199
30 % 744 749 16
Entity #2 | Chains: E,F
rho GDP dissociation inhibitor alpha protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20532
95 % 6 6 8859
90 % 6 6 8772
70 % 6 6 8400
50 % 6 6 7625
40 % 6 6 7005
30 % 6 6 6168

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.