Sequence Similarity Clusters for the Entities in PDB 1CC0

Entity #1 | Chains: A,C
transforming protein rhoA protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 1967
95 % 43 43 688 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 43 43 714
70 % 45 45 713
50 % 136 137 193
40 % 137 138 208
30 % 777 782 16
Entity #2 | Chains: E,F
rho GDP dissociation inhibitor alpha protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21544
95 % 6 6 9290 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.0
PDBFlex
90 % 6 6 9191
70 % 6 6 8802
50 % 6 6 7966
40 % 6 6 7319
30 % 6 6 6453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.