Sequence Similarity Clusters for the Entities in PDB 1CBW

Entity #1 | Chains: A,F
BOVINE CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,G
BOVINE CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 38 819
95 % 33 38 1121 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 33 38 1145
70 % 33 40 1139
50 % 33 40 1179
40 % 35 42 1145
30 % 42 50 981
Entity #3 | Chains: C,H
BOVINE CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 38 820
95 % 33 38 1122 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 33 38 1147
70 % 33 40 1142
50 % 36 43 1112
40 % 44 52 978
30 % 44 52 951
Entity #4 | Chains: D,I
BPTI protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 44 320
95 % 74 90 240 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 79 95 245
70 % 98 115 173
50 % 118 148 174
40 % 125 162 173
30 % 125 162 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.