Sequence Similarity Clusters for the Entities in PDB 1CBS

Entity #1 | Chains: A
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 3293
95 % 26 53 662 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 26 53 682
70 % 26 56 677
50 % 26 56 730
40 % 118 215 153
30 % 362 769 23

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures