Sequence Similarity Clusters for the Entities in PDB 1CBS

Entity #1 | Chains: A
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 3213
95 % 26 53 640 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 26 53 663
70 % 26 56 665
50 % 26 56 715
40 % 115 211 154
30 % 138 294 133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures