Sequence Similarity Clusters for the Entities in PDB 1CBS

Entity #1 | Chains: A
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 4662
95 % 30 71 546 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 30 71 563
70 % 30 74 571
50 % 30 74 598
40 % 96 196 192
30 % 150 311 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures