Sequence Similarity Clusters for the Entities in PDB 1CBQ

Entity #1 | Chains: A
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 5218
95 % 46 53 605 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 46 53 632
70 % 46 56 619
50 % 46 56 659
40 % 159 205 151
30 % 527 737 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.