Sequence Similarity Clusters for the Entities in PDB 1CB8

Entity #1 | Chains: A
PROTEIN (CHONDROITINASE AC) protein, length: 678 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16828
95 % 1 5 15600 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 5 15267
70 % 1 5 14287
50 % 1 5 12623
40 % 1 5 11328
30 % 1 5 9620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1CB8 1 A PROTEIN (CHONDROITINASE AC) 984 4.2.2.5 | Details
2 1HMU 1 A CHONDROITINASE AC 984 4.2.2.5 | Details
3 1HM2 1 A CHONDROITINASE AC 984 4.2.2.5 | Details
4 1HM3 1 A CHONDROITINASE AC 984 4.2.2.5 | Details
5 1HMW 1 A CHONDROITINASE AC 984 4.2.2.5 | Details