Sequence Similarity Clusters for the Entities in PDB 1CB8

Entity #1 | Chains: A
PROTEIN (CHONDROITINASE AC) protein, length: 678 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 16575
95 % 1 5 15392 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 5 15070
70 % 1 5 14106
50 % 1 5 12462
40 % 1 5 11183
30 % 1 5 9509

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures