Sequence Similarity Clusters for the Entities in PDB 1CAW

Entity #1 | Chains: A
CANAVALIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 6696
95 % 6 6 7301 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 6 6 7269
70 % 6 6 7065
50 % 6 6 6528
40 % 6 6 6086
30 % 6 6 5443
Entity #2 | Chains: B
CANAVALIN protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 13513
95 % 4 4 12913
90 % 4 4 12701
70 % 4 4 11962
50 % 4 4 10669
40 % 4 4 9668
30 % 4 4 8430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures