Sequence Similarity Clusters for the Entities in PDB 1CAU

Entity #1 | Chains: A
CANAVALIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6549
95 % 2 6 7148 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 2 6 7113
70 % 2 6 6926
50 % 2 6 6401
40 % 2 6 5970
30 % 2 6 5336
Entity #2 | Chains: B
CANAVALIN protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 13219
95 % 1 4 12660 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 4 12447
70 % 1 4 11724
50 % 1 4 10460
40 % 1 4 9484
30 % 1 4 8270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.