Sequence Similarity Clusters for the Entities in PDB 1CAU

Entity #1 | Chains: A
CANAVALIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6685
95 % 2 6 7284 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 2 6 7251
70 % 2 6 7050
50 % 2 6 6518
40 % 2 6 6075
30 % 2 6 5432
Entity #2 | Chains: B
CANAVALIN protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 13489
95 % 1 4 12891 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 4 12679
70 % 1 4 11944
50 % 1 4 10653
40 % 1 4 9654
30 % 1 4 8418

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures