Sequence Similarity Clusters for the Entities in PDB 1CA9

Entity #1 | Chains: A,B,C,D,E,F
PROTEIN (TNF RECEPTOR ASSOCIATED FACTOR 2) protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 7070
95 % 8 10 1052 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 8 10 1068
70 % 8 10 1109
50 % 9 18 929
40 % 10 21 823
30 % 13 25 745
Entity #2 | Chains: G,H
PROTEIN (TNF-R2) protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.